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 3J0Q | pdb_00003j0q

Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth L]Rase3j0qL1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: RasECOD (v295.2)
H [auth S]Ribosomal_S17,Ribosomal_S17_Ne3j0qS1 A: alpha arraysX: beta-propeller-likeH: beta-propellerT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (v295.2)
Q [auth k]CoV_NSP4_Ce3j0qk2 A: alpha arraysX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: CoV_NSP4_CECOD (v295.2)
P [auth J]Rase3j0qJ1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: RasECOD (v295.2)
O [auth B]SapB_2,SapB_1e3j0qB3 A: alpha arraysX: Fusion glycoprotein F2H: Fusion glycoprotein F2T: Fusion glycoprotein F2F: SapB_2,SapB_1ECOD (v295.2)
J [auth X]Ribosomal_S30e3j0qX1 A: alpha arraysX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: Ribosomal_S30ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
O [auth B]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain