Crystal structure of sugar phosphate isomerase from a cupin superfamily SPO2919 from Silicibacter pomeroyi (YP_168127.1) from SILICIBACTER POMEROYI DSS-3 at 2.30 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Ribosomal_L36 | e3i7dB1 | A: beta barrels | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Ribosomal_L36 | ECOD (v294.2) |
| A | Rhodanese | e3i7dA1 | A: beta barrels | X: Alpha-beta plaits | H: HMA-related | T: HMA, heavy metal-associated domain | F: Rhodanese | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
| A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07883 | Cupin domain (Cupin_2) | Cupin domain | This family represents the conserved barrel domain of the 'cupin' superfamily [1] ('cupa' is the Latin term for a small barrel). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| sugar phosphate isomerase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051610 | Glucose-6-phosphate isomerase/Oxalate decarboxylase | Family | |
| IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
| IPR013096 | Cupin 2, conserved barrel | Domain | |
| IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |














