3I5G
Crystal structure of rigor-like squid myosin S1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3i5gb_ | All alpha proteins | EF Hand-like | EF-hand | automated matches | automated matches | (Todarodes pacificus ) [TaxId: 6637 ], | SCOPe (2.08) |
C | d3i5gc_ | All alpha proteins | EF Hand-like | EF-hand | Calmodulin-like | automated matches | (Todarodes pacificus ) [TaxId: 6637 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Myosin_N | e3i5gA2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N | ECOD (1.6) |
A | KOG0161_1st | e3i5gA1 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: KOG0161_1st | ECOD (1.6) |
A | Myosin_head | e3i5gA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
B | EF-hand_7_8 | e3i5gB2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
B | EF-hand_7_4 | e3i5gB1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_4 | ECOD (1.6) |
C | EF-hand_7_8 | e3i5gC2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
C | EF-hand_7_4 | e3i5gC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
C | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00612 | IQ calmodulin-binding motif (IQ) | IQ calmodulin-binding motif | - | Motif | |
PF02736 | Myosin N-terminal SH3-like domain (Myosin_N) | Myosin N-terminal SH3-like domain | This domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. | Domain | |
PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain | |
PF13405 | EF-hand domain (EF-hand_6) | EF-hand domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR014751 | DNA repair protein XRCC4-like, C-terminal | Homologous Superfamily | |
IPR001609 | Myosin head, motor domain-like | Domain | |
IPR002928 | Myosin tail | Domain | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR050403 | Myosin regulatory light chain | Family | |
IPR050230 | Calmodulin/Myosin light chain/Troponin C-like | Family | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |