3H82
Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains with the artificial ligand THS020
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d3h82a1 | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | Hypoxia-inducible factor Hif2a, C-terminal domain | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth A] | d3h82a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A [auth B] | d3h82b1 | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A [auth B] | d3h82b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | PYP-like sensor domain (PAS domain) | 8038443 | 3000471 | SCOP2B (2021-05-27) |
A [auth B] | SCOP2B Superfamily | PYP-like sensor domain (PAS domain) | 8088404 | 3000471 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | PF14598 | e3h82A1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF14598 | ECOD (1.6) |
A [auth B] | PF14598 | e3h82B1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF14598 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
A [auth B] | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF14598 | PAS domain (PAS_11) | PAS domain | This family includes the PAS-B domain of NCOA1 (Nuclear receptor coactivator 1), which binds to an LXXLL motif in the C-terminal region of STAT6 (Signal transducer and activator of transcription 6) [1]. | Domain |
A [auth B] | PF14598 | PAS domain (PAS_11) | PAS domain | This family includes the PAS-B domain of NCOA1 (Nuclear receptor coactivator 1), which binds to an LXXLL motif in the C-terminal region of STAT6 (Signal transducer and activator of transcription 6) [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A] | IPR021537 | Hypoxia-inducible factor, alpha subunit-like | Domain |
B [auth A] | IPR014887 | HIF-1 alpha, C-terminal transactivation domain | Domain |
B [auth A] | IPR013767 | PAS fold | Domain |
B [auth A] | IPR001067 | Nuclear translocator | Family |
B [auth A] | IPR000014 | PAS domain | Domain |
B [auth A] | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain |
B [auth A] | IPR035965 | PAS domain superfamily | Homologous Superfamily |
B [auth A] | IPR001610 | PAC motif | Repeat |
B [auth A] | IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR013767 | PAS fold | Domain |
A [auth B] | IPR001067 | Nuclear translocator | Family |
A [auth B] | IPR000014 | PAS domain | Domain |
A [auth B] | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain |
A [auth B] | IPR035965 | PAS domain superfamily | Homologous Superfamily |
A [auth B] | IPR001610 | PAC motif | Repeat |
A [auth B] | IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily |