3GQB
Crystal Structure of the A3B3 complex from V-ATPase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8018284 | 4004011 | SCOP2 (2022-06-29) |
A | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8018289 | 4002275 | SCOP2 (2022-06-29) |
A | SCOP2 Family | VatA barrel-sandwich hybrid domain-like | 8018292 | 4004012 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |
B | SCOP2 Family | ATP synthase alpha/beta N-terminal domain-like | 8018297 | 4002275 | SCOP2 (2022-06-29) |
B | SCOP2 Family | ATP synthase nucleotide-binding domain-like | 8018300 | 4004011 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ATP-synt_ab_N | e3gqbA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
A | ATP-synt_ab_C | e3gqbA5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
A | ATP-synt_ab_Xtn | e3gqbA3 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: ATP-synt_ab_Xtn | ECOD (1.6) |
A | ATP-synt_ab | e3gqbA4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
C | ATP-synt_ab_N | e3gqbC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
C | ATP-synt_ab_C | e3gqbC5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
C | ATP-synt_ab_Xtn | e3gqbC3 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: ATP-synt_ab_Xtn | ECOD (1.6) |
C | ATP-synt_ab | e3gqbC4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
D | ATP-synt_ab_N | e3gqbD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
D | ATP-synt_ab_C | e3gqbD5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
D | ATP-synt_ab | e3gqbD4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
B | ATP-synt_ab_N | e3gqbB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
B | ATP-synt_ab_C | e3gqbB5 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
B | ATP-synt_ab | e3gqbB4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF16886 | ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn) | ATPsynthase alpha/beta subunit N-term extension | - | Family | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |