3GON
Streptococcus pneumoniae Phosphomevalonate Kinase in Complex with Phosphomevalonate and AMPPNP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3gona1 | Alpha and beta proteins (a+b) | Ribosomal protein S5 domain 2-like | Ribosomal protein S5 domain 2-like | GHMP Kinase, N-terminal domain | automated matches | (Streptococcus pneumoniae R6 ) [TaxId: 171101 ], | SCOPe (2.08) |
A | d3gona2 | Alpha and beta proteins (a+b) | Ferredoxin-like | GHMP Kinase, C-terminal domain | Phosphomevalonate kinase (PMK) | automated matches | (Streptococcus pneumoniae R6 ) [TaxId: 171101 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GHMP_kinases_N | e3gonA2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
A | GHMP_kinases_C | e3gonA1 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (4.3.0) |
A | 3.30.70.890 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | GHMP kinase, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08544 | GHMP kinases C terminal (GHMP_kinases_C) | GHMP kinases C terminal | - | Family | |
PF00288 | GHMP kinases N terminal domain (GHMP_kinases_N) | GHMP kinases N terminal domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006204 | GHMP kinase N-terminal domain | Domain | |
IPR035102 | Phosphomevalonate kinase | Family | |
IPR013750 | GHMP kinase, C-terminal domain | Domain | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR005917 | Phosphomevalonate kinase, bacteria | Family | |
IPR036554 | GHMP kinase, C-terminal domain superfamily | Homologous Superfamily | |
IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |