Annotations: 3GM8

Crystal structure of a beta-glycosidase from Bacteroides vulgatus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	E-set domains of sugar-utilizing enzymes	8045422	4007565	SCOP2 (2022-06-29)
A	SCOP2 Family	E-set domains of sugar-utilizing enzymes	8090584	4007565	SCOP2 (2022-06-29)
A	SCOP2 Family	beta-Galactosidase N-terminal domain-like	8090586	4002476	SCOP2 (2022-06-29)
A	SCOP2 Family	beta-Galactosidase/glucuronidase domain	8090588	4007531	SCOP2 (2022-06-29)
A	SCOP2 Family	beta-glycanases	8090590	4003164	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	E set domains	8090583	3000070	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	E set domains	8090585	3000070	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	galactose-binding domain-like	8090587	3000087	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	beta-Galactosidase/glucuronidase domain-like	8090589	3002047	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8090591	3000313	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_2	e3gm8A1	A: alpha arrays	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: Glyco_hydro_2	ECOD (v295.2)
A	C1-set	e3gm8A5	A: alpha arrays	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: C1-set	ECOD (v295.2)
A	A2M_BRD	e3gm8A6	A: alpha arrays	X: DP domain	H: DP domain	T: DP domain	F: A2M_BRD	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Glycoside hydrolase family 2, candidate beta-glycosidase	hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR032311	Domain of unknown function DUF4982	Domain
A	IPR051913	Glycosyl Hydrolase 2 Domain-Containing Protein	Family
A	IPR006102	Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich	Domain
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR006101	Glycoside hydrolase, family 2	Family
A	IPR040605	Glycoside hydrolase family 2, domain 5	Domain
A	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A	IPR036156	Beta-Galactosidase/glucuronidase domain superfamily	Homologous Superfamily
A	IPR006104	Glycosyl hydrolases family 2, sugar binding domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR006103	Glycoside hydrolase family 2, catalytic domain	Domain
A	IPR023232	Glycoside hydrolase, family 2, active site	Active Site