3GDW
Crystal structure of sigma-54 interaction domain protein from Enterococcus faecalis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EIIA-man | e3gdwA1 | A: a/b three-layered sandwiches | X: EDD domain (From Topology) | H: EDD domain (From Topology) | T: EDD domain | F: EIIA-man | ECOD (1.6) |
B | EIIA-man | e3gdwB1 | A: a/b three-layered sandwiches | X: EDD domain (From Topology) | H: EDD domain (From Topology) | T: EDD domain | F: EIIA-man | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.510 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Phosphotransferase system, mannose-type IIA component | CATH (4.3.0) |
B | 3.40.50.510 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Phosphotransferase system, mannose-type IIA component | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03610 | PTS system fructose IIA component (EIIA-man) | PTS system fructose IIA component | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036634 | PRD domain superfamily | Homologous Superfamily | |
IPR004701 | Phosphotransferase system, mannose-type IIA component | Domain | |
IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR011608 | PRD domain | Domain | |
IPR036662 | Phosphotransferase system, mannose-type IIA component superfamily | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR033887 | PTS system mannose/sorbose specific IIA subunit | Domain | |
IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |