3FIP
Crystal structure of Usher PapC translocation pore
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Usher_1st | e3fipA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Usher PapC translocation pore (From Topology) | T: Usher PapC translocation pore | F: Usher_1st | ECOD (1.6) |
A | Usher_2nd | e3fipA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Usher_2nd | ECOD (1.6) |
B | Usher_1st | e3fipB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Usher PapC translocation pore (From Topology) | T: Usher PapC translocation pore | F: Usher_1st | ECOD (1.6) |
B | Usher_2nd | e3fipB4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Usher_2nd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00577 | Outer membrane usher protein (Usher) | Outer membrane usher protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Outer membrane usher protein papC |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR042186 | Outer membrane usher protein FimD, plug domain | Homologous Superfamily | |
IPR037224 | PapC, N-terminal domain superfamily | Homologous Superfamily | |
IPR018030 | Fimbrial membrane usher, conserved site | Conserved Site | |
IPR025885 | PapC, N-terminal domain | Domain | |
IPR043142 | PapC-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR025949 | PapC-like, C-terminal domain | Domain | |
IPR000015 | Outer membrane usher protein | Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Beta-Barrel Membrane Proteins: Monomeric/Dimeric | P pilus usher translocation domain, PapC146-637 |