3FG1
Crystal structure of Delta413-417:GS LOX
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PLAT | e3fg1A4 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
A | Lipoxygenase | e3fg1A3 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
B | PLAT | e3fg1B8 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
B | Lipoxygenase | e3fg1B7 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
C | PLAT | e3fg1C6 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
C | Lipoxygenase | e3fg1C5 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
D | PLAT | e3fg1D8 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
D | Lipoxygenase | e3fg1D7 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
A | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
A | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
B | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
B | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
B | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
C | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
C | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
C | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
D | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
D | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
D | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00305 | Lipoxygenase (Lipoxygenase) | Lipoxygenase | - | Domain | |
PF01477 | PLAT/LH2 domain (PLAT) | PLAT/LH2 domain | This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain bind ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020834 | Lipoxygenase, conserved site | Conserved Site | |
IPR020835 | Catalase superfamily | Homologous Superfamily | |
IPR036392 | PLAT/LH2 domain superfamily | Homologous Superfamily | |
IPR001024 | PLAT/LH2 domain | Domain | |
IPR036226 | Lipoxigenase, C-terminal domain superfamily | Homologous Superfamily | |
IPR000907 | Lipoxygenase | Family | |
IPR020833 | Lipoxygenase, iron binding site | Binding Site | |
IPR013819 | Lipoxygenase, C-terminal | Domain | |
IPR001885 | Lipoxygenase, mammalian | Family |