Crystal Structure of Epstein-Barr virus gp42 protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3fd4b_ | Alpha and beta proteins (a+b) | C-type lectin-like | C-type lectin-like | C-type lectin domain | automated matches | (Human herpesvirus 4 strain B95-8 ) [TaxId: 10377 ], | SCOPe (2.08) |
| A | d3fd4a_ | Alpha and beta proteins (a+b) | C-type lectin-like | C-type lectin-like | C-type lectin domain | automated matches | (Human herpesvirus 4 strain B95-8 ) [TaxId: 10377 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | YgbB | e3fd4B1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: YgbB | ECOD (v295.2) |
| A | V-set | e3fd4A1 | A: alpha arrays | X: Alpha-beta plaits | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
| A | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Glycoprotein gp42 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily | |
| IPR016187 | C-type lectin fold | Homologous Superfamily |