Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | V-set | e3f12B3 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: V-set | ECOD (v294.1) |
| D | HTH_3 | e3f12D1 | A: a/b three-layered sandwiches | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3 | ECOD (v294.1) |
| A | HTH_3 | e3f12A1 | A: a/b three-layered sandwiches | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3 | ECOD (v294.1) |
| C | HTH_3 | e3f12C1 | A: a/b three-layered sandwiches | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| M2J1 neutralizing human cytomegalovirus | VH-CH1 | Homo sapiens (human) | IGHV3-30*18, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202615-0) | |
| M2J1 neutralizing human cytomegalovirus | L-KAPPA | Homo sapiens (human) | IGKV3-11*01, IGKJ1*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202615-0) |














