3EP1
Structure of the PGRP-Hd from Alvinella pompejana
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3ep1a_ | Alpha and beta proteins (a+b) | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | automated matches | automated matches | (Alvinella pompejana ) [TaxId: 6376 ], | SCOPe (2.08) |
B | d3ep1b_ | Alpha and beta proteins (a+b) | N-acetylmuramoyl-L-alanine amidase-like | N-acetylmuramoyl-L-alanine amidase-like | automated matches | automated matches | (Alvinella pompejana ) [TaxId: 6376 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | N-acetylmuramoyl-L-alanine amidase-like | 8067274 | 4001915 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | N-acetylmuramoyl-L-alanine amidase-like | 8067275 | 3000555 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | N-acetylmuramoyl-L-alanine amidase-like | 8067275 | 3000555 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Amidase_2 | e3ep1A1 | A: a+b three layers | X: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | H: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | T: N-acetylmuramoyl-L-alanine amidase-like | F: Amidase_2 | ECOD (1.6) |
B | Amidase_2 | e3ep1B1 | A: a+b three layers | X: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | H: N-acetylmuramoyl-L-alanine amidase-like (From Topology) | T: N-acetylmuramoyl-L-alanine amidase-like | F: Amidase_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.80.10 | Alpha Beta | 3-Layer(aba) Sandwich | Lysozyme-like | Peptidoglycan recognition protein-like | CATH (4.3.0) |
B | 3.40.80.10 | Alpha Beta | 3-Layer(aba) Sandwich | Lysozyme-like | Peptidoglycan recognition protein-like | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002502 | N-acetylmuramoyl-L-alanine amidase domain | Domain | |
IPR006619 | Peptidoglycan recognition protein family domain, metazoa/bacteria | Domain | |
IPR036505 | N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily | Homologous Superfamily | |
IPR015510 | Peptidoglycan recognition protein | Family |