3EFB
Crystal Structure of Probable sor Operon Regulator from Shigella flexneri
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3efba1 | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | SorC sugar-binding domain-like | Sor-operon regulator SorC | (Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ], | SCOPe (2.08) |
B | d3efbb_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | SorC sugar-binding domain-like | automated matches | (Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ], | SCOPe (2.08) |
C | d3efbc_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | SorC sugar-binding domain-like | automated matches | (Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ], | SCOPe (2.08) |
D | d3efbd_ | Alpha and beta proteins (a/b) | NagB/RpiA/CoA transferase-like | NagB/RpiA/CoA transferase-like | SorC sugar-binding domain-like | automated matches | (Shigella flexneri 2a str. 2457T ) [TaxId: 198215 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8041030 | 3000693 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8041030 | 3000693 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | NagB/RpiA/CoA transferase-like | 8041030 | 3000693 | SCOP2B (2022-06-29) |
D | SCOP2 Family | DeoR/SorC sugar-binding domain-like | 8028651 | 4002188 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | NagB/RpiA/CoA transferase-like | 8041030 | 3000693 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04198 | e3efbA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF04198 | ECOD (1.6) |
B | PF04198 | e3efbB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF04198 | ECOD (1.6) |
C | PF04198 | e3efbC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF04198 | ECOD (1.6) |
D | PF04198 | e3efbD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NagB/RpiA/CoA transferase-like | F: PF04198 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
D | 3.40.50.1360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR051054 | Bacterial SorC Transcriptional Regulators | Family | |
IPR007324 | Sugar-binding domain, putative | Domain | |
IPR037171 | NagB/RpiA transferase-like | Homologous Superfamily | |
IPR011991 | ArsR-like helix-turn-helix domain | Domain | |
IPR025246 | Transposase IS30-like HTH domain | Domain |