Annotations: 3EEY

CRYSTAL STRUCTURE OF PUTATIVE RRNA-METHYLASE FROM Clostridium thermocellum

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
F	SCOP2 Family	YtqB-like	8048989	4006296	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8090810	3000118	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	HRM	e3eeyJ1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
I	HRM	e3eeyI1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
H	HRM	e3eeyH1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
G	HRM	e3eeyG1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
F	HRM	e3eeyF1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
E	HRM	e3eeyE1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
D	HRM	e3eeyD1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
C	HRM	e3eeyC1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
B	HRM	e3eeyB1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HRM	ECOD (v295.2)
A	Ephrin_lbd	e3eeyA1	A: alpha arrays	X: Profilin-like	H: sensor domains	T: sensor domains	F: Ephrin_lbd	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
I	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
H	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
G	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
F	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
E	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
D	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
C	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
B	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF06962	Methyltransferase MnmM-like (MnmM)	Methyltransferase MnmM-like	This entry represents the family of tRNA (mnm(5)s(2)U34)-methyltransferase MnmM (also known as YtqB in Bacillus subtilis) and related proteins. This enzyme is involved in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm5s2U) at the wobble p ...	This entry represents the family of tRNA (mnm(5)s(2)U34)-methyltransferase MnmM (also known as YtqB in Bacillus subtilis) and related proteins. This enzyme is involved in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm5s2U) at the wobble position (U34) in tRNA by catalysing the transfer of a methyl group from S-adenosyl-L-methionine to nm5s2U34 to form mnm5s2U34 [1]. It adopts a typical SAM-dependent class I methyltransferase fold [1,2].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR010719	Methyltransferase MnmM-like	Family