3E2H
Structure of the m67 high-affinity mutant of the 2C TCR in complex with Ld/QL9
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | MHC antigen-recognition domain | 8034809 | 3000521 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8055397 | 3000071 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054445 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00129 | e3e2hA1 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: PF00129 | ECOD (1.6) |
C [auth B] | PF07686 | e3e2hB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth C] | PF07686 | e3e2hC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.500.10 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (4.3.0) |
C [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth C] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
MH1 H2-Ld-2 | G-ALPHA1-ALPHA2 | Mus musculus (house mouse) | H2-Ld-2, H2-L*03 | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2 | MH | (G-ALPHA1-ALPHA2) | IMGT (202431-0) | |
C [auth B] | TR V(alpha)PHDS58 - V(beta)M67 | V-ALPHA | Mus musculus (house mouse) | TRAV9-4*01, TRAJ35*01, TRAJ35*02 | V-DOMAIN V-ALPHA | TR | FV-ALPHA_BETA | IMGT (202431-0) |
D [auth C] | TR V(alpha)PHDS58 - V(beta)M67 | V-BETA | Mus musculus (house mouse) | TRBV13-2*01, TRBV13-2*03, TRBJ2-4*01 | V-DOMAIN V-BETA | TR | FV-ALPHA_BETA | IMGT (202431-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | - | Domain | |
C [auth B] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
D [auth C] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |