3DOM
Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3domb_ | Alpha and beta proteins (a+b) | TFB5-like | TFB5-like | automated matches | automated matches | yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
D | d3domd_ | Alpha and beta proteins (a+b) | TFB5-like | TFB5-like | automated matches | automated matches | yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG3471 | e3domA1 | A: a+b complex topology | X: TFB5-related (From Topology) | H: TFB5-related (From Topology) | T: TFB5-related | F: KOG3471 | ECOD (1.6) |
C | KOG3471 | e3domC1 | A: a+b complex topology | X: TFB5-related (From Topology) | H: TFB5-related (From Topology) | T: TFB5-related | F: KOG3471 | ECOD (1.6) |
B | Tfb5 | e3domB1 | A: a+b complex topology | X: TFB5-related (From Topology) | H: TFB5-related (From Topology) | T: TFB5-related | F: Tfb5 | ECOD (1.6) |
D | Tfb5 | e3domD1 | A: a+b complex topology | X: TFB5-related (From Topology) | H: TFB5-related (From Topology) | T: TFB5-related | F: Tfb5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.2610 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
C | 3.30.70.2610 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
B | 3.30.70.1220 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | TFB5-like | CATH (4.3.0) |
D | 3.30.70.1220 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | TFB5-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18307 | Transcription factor Tfb2 (p52) C-terminal domain (Tfb2_C) | Transcription factor Tfb2 (p52) C-terminal domain | This is the C-terminal domain of Transcription factor Tfb2 present in Saccharomyces cerevisiae. Tfb2 is referred to as p52 in humans. The interaction between p8-Tfb5 and p52-Tfb2 has a key role in the maintenance of the transcription factor TFIIH arc ... | Domain | |
PF06331 | Transcription factor TFIIH complex subunit Tfb5 (Tfb5) | Transcription factor TFIIH complex subunit Tfb5 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR040662 | Transcription factor Tfb2, C-terminal domain | Domain | |
IPR004598 | Transcription factor TFIIH subunit p52/Tfb2 | Family | |
IPR009400 | TFIIH subunit TTDA/Tfb5 | Family | |
IPR035935 | TFB5-like superfamily | Homologous Superfamily |