3DHZ
Apo (iron free) structure of C. ammoniagenes R2 protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dhza_ | All alpha proteins | Ferritin-like | Ferritin-like | Ribonucleotide reductase-like | Ribonucleotide reductase R2 | Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ], | SCOPe (2.08) |
B | d3dhzb_ | All alpha proteins | Ferritin-like | Ferritin-like | Ribonucleotide reductase-like | Ribonucleotide reductase R2 | Brevibacterium ammoniagenes (Corynebacterium ammoniagenes ) [TaxId: 1697 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00268 | e3dhzA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF00268 | ECOD (1.6) |
B | PF00268 | e3dhzB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF00268 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (4.3.0) |
B | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00268 | Ribonucleotide reductase, small chain (Ribonuc_red_sm) | Ribonucleotide reductase, small chain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR026494 | Ribonucleoside-diphosphate reductase subunit beta | Family | |
IPR000358 | Ribonucleotide reductase small subunit family | Family | |
IPR030475 | Ribonucleotide reductase small subunit, acitve site | Active Site | |
IPR033909 | Ribonucleotide reductase small subunit | Family | |
IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily |