3D6R
Structure of an avian influenza A virus NS1 protein effector domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d3d6rb1 | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus (A/duck/Alberta/60/1976(H12N5)) ) [TaxId: 385582 ], | SCOPe (2.08) |
B [auth A] | d3d6ra_ | Alpha and beta proteins (a+b) | Ns1 effector domain-like | Ns1 effector domain-like | Ns1 effector domain-like | automated matches | (Influenza A virus (A/duck/Alberta/60/1976(H12N5)) ) [TaxId: 385582 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2 Family | Ns1 effector domain-like | 8086497 | 4003394 | SCOP2 (2022-06-29) |
A [auth B] | SCOP2 Superfamily | Ns1 effector domain-like | 8086498 | 3000759 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Ns1 effector domain-like | 8086498 | 3000759 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Flu_NS1_C | e3d6rB1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
B [auth A] | Flu_NS1_C | e3d6rA1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
B [auth A] | 3.30.420.330 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR038064 | Influenza A virus NS1, effector domain-like superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR000256 | Influenza A virus NS1 protein | Family |
A [auth B], B [auth A] | IPR004208 | Influenza non-structural protein (NS1) | Family |