3D3K
Crystal structure of human Edc3p
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | YjeF N-terminal domain-like | 8054234 | 3000851 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | YjeF N-terminal domain-like | 8054234 | 3000851 | SCOP2B (2022-06-29) |
C | SCOP2 Family | YjeF N-terminal domain-like | 8045046 | 4003429 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | YjeF N-terminal domain-like | 8054234 | 3000851 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | YjeF N-terminal domain-like | 8054234 | 3000851 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | YjeF_N | e3d3kA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: YjeF_N | ECOD (1.6) |
B | YjeF_N | e3d3kB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: YjeF_N | ECOD (1.6) |
C | YjeF_N | e3d3kC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: YjeF_N | ECOD (1.6) |
D | YjeF_N | e3d3kD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: YjeF_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10260 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | YjeF N-terminal domain | CATH (4.3.0) |
B | 3.40.50.10260 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | YjeF N-terminal domain | CATH (4.3.0) |
C | 3.40.50.10260 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | YjeF N-terminal domain | CATH (4.3.0) |
D | 3.40.50.10260 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | YjeF N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03853 | YjeF-related protein N-terminus (YjeF_N) | YjeF-related protein N-terminus | YjeF-N domain is a novel version of the Rossmann fold with a set of catalytic residues and structural features that are different from the conventional dehydrogenases [1]. YjeF-N domain is fused to Ribokinases in bacteria (YjeF), where they may be ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR047575 | Sm domain | Domain | |
IPR034107 | Lsm16, N-terminal | Domain | |
IPR025762 | DFDF domain | Domain | |
IPR025609 | Lsm14-like, N-terminal | Domain | |
IPR036652 | YjeF N-terminal domain superfamily | Homologous Superfamily | |
IPR004443 | YjeF N-terminal domain | Domain | |
IPR019050 | FDF domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q96F86 | :