Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | ABC_tran | e3cz8B2 | A: alpha arrays | X: Thioredoxin-like | H: Thioredoxin-like | T: Thioredoxin-like | F: ABC_tran | ECOD (v295.2) |
| B | Glyco_hydro_32C | e3cz8B3 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Glyco_hydro_32C | ECOD (v295.2) |
| A | Alpha-amylase | e3cz8A2 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Alpha-amylase | ECOD (v295.2) |
| A | Glyco_hydro_32C | e3cz8A3 | A: alpha arrays | X: Nat/Ivy | H: Acyl-CoA N-acyltransferases (Nat) | T: Acyl-CoA N-acyltransferases (Nat) | F: Glyco_hydro_32C | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| B | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative sporulation-specific glycosylase ydhD |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051887 | Glycosyl Hydrolase 18 Domain-Containing Protein | Family | |
| IPR011583 | Chitinase II/V-like, catalytic domain | Domain | |
| IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
| IPR036779 | LysM domain superfamily | Homologous Superfamily | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR041704 | CFLE, GH18 catalytic domain | Domain | |
| IPR018392 | LysM domain | Domain | |
| IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain |