Structure of the Urease Accessory Protein UreF from Helicobacter pylori
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Ras | e3cxnC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Ras | ECOD (v295.2) |
| B | Ras | e3cxnB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Ras | ECOD (v295.2) |
| A | UreF | e3cxnA1 | A: alpha arrays | X: Hormone receptor domain (HRM, Pfam 02793) | H: Lesion bypass DNA polymerase (Y-family), little finger domain | T: Lesion bypass DNA polymerase (Y-family), little finger domain | F: UreF | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 1.10.4190.10 | Mainly Alpha | Orthogonal Bundle | Urease accessory protein UreF | Urease accessory protein UreF | CATH (4.3.0) |
| B | 1.10.4190.10 | Mainly Alpha | Orthogonal Bundle | Urease accessory protein UreF | Urease accessory protein UreF | CATH (4.3.0) |
| A | 1.10.4190.10 | Mainly Alpha | Orthogonal Bundle | Urease accessory protein UreF | Urease accessory protein UreF | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01730 | UreF (UreF) | UreF | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Urease accessory protein ureF |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038277 | UreF domain superfamily | Homologous Superfamily | |
| IPR002639 | Urease accessory protein UreF-like | Family |