Annotations: 3CWX

Crystal structure of cagd from helicobacter pylori pathogenicity island

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	CagD-like	8092205	3002571	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CagD-like	8092205	3002571	SCOP2B (2022-06-29)
A	SCOP2 Family	CagD-like	8045791	4004688	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CagD-like	8092205	3002571	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	IL7	e3cwxB1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: IL7	ECOD (v294.2)
C	IL7	e3cwxC1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: IL7	ECOD (v294.2)
A	CagD	e3cwxA1	A: beta barrels	X: Type III secretory system chaperone-like	H: protein CagD	T: protein CagD	F: CagD	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.1420.20	Alpha Beta	3-Layer(aba) Sandwich	Inhibitor of vertebrate lysozyme, Ivy	Pathogenicity island component CagD	CATH (4.3.0)
C	3.40.1420.20	Alpha Beta	3-Layer(aba) Sandwich	Inhibitor of vertebrate lysozyme, Ivy	Pathogenicity island component CagD	CATH (4.3.0)
A	3.40.1420.20	Alpha Beta	3-Layer(aba) Sandwich	Inhibitor of vertebrate lysozyme, Ivy	Pathogenicity island component CagD	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	protein CagD	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR032336	Pathogenicity island component CagD	Family
A, B, C	IPR038229	Pathogenicity island component CagD superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.