3CPZ
Crystal structure of VAR2CSA DBL3x domain in the presence of dodecasaccharide of CSA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Duffy_binding | e3cpzA2 | A: alpha bundles | X: Duffy-binding-like domain, N-terminal subdomain (From Topology) | H: Duffy-binding-like domain, N-terminal subdomain (From Topology) | T: Duffy-binding-like domain, N-terminal subdomain | F: Duffy_binding | ECOD (1.6) |
A | PTZ00176 | e3cpzA1 | A: alpha bundles | X: Duffy-binding-like domain, C-terminal subdomain (From Topology) | H: Duffy-binding-like domain, C-terminal subdomain (From Topology) | T: Duffy-binding-like domain, C-terminal subdomain | F: PTZ00176 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1310.20 | Mainly Alpha | Up-down Bundle | 5 helical Cullin repeat like | Duffy-antigen binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05424 | Duffy binding domain (Duffy_binding) | Duffy binding domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Erythrocyte membrane protein 1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008602 | Duffy-antigen binding domain | Domain | |
IPR044932 | Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment superfamily | Homologous Superfamily | |
IPR042202 | Duffy-antigen binding superfamily | Homologous Superfamily | |
IPR032761 | Plasmodium falciparum erythrocyte membrane protein 1, N-terminal | Domain | |
IPR029211 | Plasmodium falciparum erythrocyte membrane protein 1, acidic terminal segment | Domain |