Crystal structure of a methyltransferase (NP_951602.1) from Geobacter sulfurreducens at 1.90 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d3c3pc_ | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | automated matches | automated matches | (Geobacter sulfurreducens PCA ) [TaxId: 243231 ], | SCOPe (2.08) |
| B | d3c3pb_ | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | automated matches | automated matches | (Geobacter sulfurreducens PCA ) [TaxId: 243231 ], | SCOPe (2.08) |
| A | d3c3pa1 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | automated matches | automated matches | (Geobacter sulfurreducens PCA ) [TaxId: 243231 ], | SCOPe (2.08) |
| A | d3c3pa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Geobacter sulfurreducens PCA ) [TaxId: 243231 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8087017 | 3000118 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8087017 | 3000118 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | COMT-like | 8087016 | 4000655 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8087017 | 3000118 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | DUF3239 | e3c3pC1 | A: beta barrels | X: HTH | H: Nudix | T: Nudix | F: DUF3239 | ECOD (v294.2) |
| B | DUF3239 | e3c3pB1 | A: beta barrels | X: HTH | H: Nudix | T: Nudix | F: DUF3239 | ECOD (v294.2) |
| A | HRM | e3c3pA1 | A: beta barrels | X: Profilin-like | H: sensor domains | T: sensor domains | F: HRM | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
| B | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
| A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01596 | O-methyltransferase (Methyltransf_3) | O-methyltransferase | Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase Swiss:P21964, caffeoyl-CoA O-methyltransferase Swiss:Q43095 and a family of bacterial O-methyltransferases that may be involved in antibiotic production ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Methyltransferase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
| IPR002935 | Class I-like SAM-dependent O-methyltransferase | Family |














