Annotations: 3BYW

Crystal structure of an extracellular domain of arabinofuranosyltransferase from Corynebacterium diphtheriae

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
F	SCOP2 Family	DIP0159 extracellular domain-like	8046186	4004938	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2 (2022-06-29)
H	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8093012	3000120	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Arabino_trans_N	e3bywA1	A: beta barrels	X: jelly-roll	H: Concanavalin A-like	T: Concanavalin A-like lectins/glucanases	F: Arabino_trans_N	ECOD (v294.2)
B	DUF3239	e3bywB1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
C	DUF3239	e3bywC1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
F	DUF3239	e3bywF1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
H	DUF3239	e3bywH1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
G	DUF3239	e3bywG1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
E	DUF3239	e3bywE1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)
D	DUF3239	e3bywD1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: DUF3239	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
B	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
C	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
F	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
H	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
G	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
E	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)
D	2.60.120.610	Mainly Beta	Sandwich	Jelly Rolls	arabinofuranosyltransferase like domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Putative arabinofuranosyltransferase	cation binding ion binding binding metal ion binding small molecule binding pentosyltransferase activity arabinosyltransferase activity glycosyltransferase activity transferase activity catalytic activity	cellular component biogenesis peptidoglycan-based cell wall biogenesis cell wall biogenesis cell wall organization or biogenesis Actinobacterium-type cell wall biogenesis cellular process cellular component organization or biogenesis cellular component organization cell wall organization external encapsulating structure organization	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR040920	Arabinosyltransferas, concanavalin like domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032731	Arabinosyltransferase, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR007680	Arabinofuranosyltransferase, central domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR042486	Arabinosyltransferase, C-terminal, subdomain 2	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR027451	Arabinofuranosyltransferase, domain 1	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.