3BT1
Structure of urokinase receptor, urokinase and vitronectin complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3bt1a1 | Small proteins | Knottins (small inhibitors, toxins, lectins) | EGF/Laminin | EGF-type module | Plasminogen activator (urokinase-type) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d3bt1a2 | Small proteins | Kringle-like | Kringle-like | Kringle modules | Urokinase-type plasminogen activator | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3bt1b_ | Small proteins | Somatomedin B domain | Somatomedin B domain | Somatomedin B domain | Vitronectin | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth U] | d3bt1u1 | Small proteins | Snake toxin-like | Snake toxin-like | Extracellular domain of cell surface receptors | Urokinase plasminogen activator surface receptor uPAR | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EGF/Laminin-like | 8042597 | 3000412 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Kringle-like | 8042599 | 3000761 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Somatomedin B domain | 8033943 | 3001699 | SCOP2B (2022-06-29) |
C [auth U] | SCOP2B Superfamily | Snake toxin-like | 8032874 | 3000545 | SCOP2B (2022-06-29) |
C [auth U] | SCOP2B Superfamily | Snake toxin-like | 8032873 | 3000545 | SCOP2B (2022-06-29) |
C [auth U] | SCOP2B Superfamily | Snake toxin-like | 8032872 | 3000545 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Kringle | e3bt1A1 | A: few secondary structure elements | X: Kringle-like (From Topology) | H: Kringle-like (From Topology) | T: Kringle-like | F: Kringle | ECOD (1.6) |
A | EGF | e3bt1A2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF | ECOD (1.6) |
B | Somatomedin_B | e3bt1B1 | A: few secondary structure elements | X: Somatomedin B domain (From Topology) | H: Somatomedin B domain (From Topology) | T: Somatomedin B domain | F: Somatomedin_B | ECOD (1.6) |
C [auth U] | UPAR_LY6 | e3bt1U1 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: UPAR_LY6 | ECOD (1.6) |
C [auth U] | UPAR_LY6_1 | e3bt1U2 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: UPAR_LY6_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
C [auth U] | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00051 | Kringle domain (Kringle) | Kringle domain | Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta. | Domain | |
PF01033 | Somatomedin B domain (Somatomedin_B) | Somatomedin B domain | - | Family | |
C [auth U] | PF00021 | u-PAR/Ly-6 domain (UPAR_LY6) | u-PAR/Ly-6 domain | This extracellular disulphide bond rich domain is related to Pfam:PF00087. | Domain |