Annotations: 3BQ3

Crystal structure of S. cerevisiae Dcn1

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	EF-hand	8055667	3001983	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	EF-hand	8055668	3001983	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	WD40, WD40_Gbeta	e3bq3A2	A: beta barrels	X: Profilin-like	H: sensor domains	T: sensor domains	F: WD40, WD40_Gbeta	ECOD (v294.2)
A	zf-MYND	e3bq3A3	A: beta barrels	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: zf-MYND	ECOD (v294.2)
A	DUF4982	e3bq3A4	A: beta barrels	X: DP domain	H: DP domain	T: DP domain	F: DUF4982	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF22566	UBA-like domain (UBA_8)	UBA-like domain	This entry represents a UBA-like domain.	Domain
A	PF03556	Cullin binding (Cullin_binding)	Cullin binding	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Defective in cullin neddylation protein 1	protein binding binding ubiquitin-like protein binding ubiquitin-like protein conjugating enzyme binding enzyme binding ubiquitin conjugating enzyme binding cullin family protein binding protein-macromolecule adaptor activity molecular adaptor activity	primary metabolic process macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein neddylation protein modification by small protein conjugation protein modification by small protein conjugation or removal	protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR042460	DCN1-like, PONY binding domain	Homologous Superfamily
A	IPR054109	UBA-like domain	Domain
A	IPR009060	UBA-like superfamily	Homologous Superfamily
A	IPR005176	Potentiating neddylation domain	Domain
A	IPR014764	Defective-in-cullin neddylation protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.