3BPQ
Crystal Structure of RelB-RelE antitoxin-toxin complex from Methanococcus jannaschii
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18506 | e3bpqA1 | A: extended segments | X: RelB-like (From Topology) | H: RelB-like (From Topology) | T: RelB-like | F: PF18506 | ECOD (1.6) |
C | PF18506 | e3bpqC1 | A: extended segments | X: RelB-like (From Topology) | H: RelB-like (From Topology) | T: RelB-like | F: PF18506 | ECOD (1.6) |
B | PF05016 | e3bpqB1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05016 | ECOD (1.6) |
D | PF05016 | e3bpqD1 | A: a+b two layers | X: RelE-like | H: RelE-like (From Topology) | T: RelE-like | F: PF05016 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 6.10.250.2100 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
D | 3.30.2310.20 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | RelE-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18506 | RelB Antitoxin (RelB-like) | RelB Antitoxin | - | Family | |
PF05016 | ParE toxin of type II toxin-antitoxin system, parDE (ParE_toxin) | ParE toxin of type II toxin-antitoxin system, parDE | ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralised by the antitoxin ParD. The family also encompasses RelE/ParE described in [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Antitoxin RelB3 | - | - | - | |
Toxin RelE3 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049537 | Antitoxin RelB-like | Family | |
IPR007712 | Toxin-antitoxin system, RelE/ParE toxin family | Family | |
IPR035093 | Toxin-antitoxin system, RelE/ParE toxin domain superfamily | Homologous Superfamily |