3BN4
Carboxysome Subunit, CcmK1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3bn4a_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
B | d3bn4b_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
C | d3bn4c_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
D | d3bn4d_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
E | d3bn4e_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
F | d3bn4f_ | Alpha and beta proteins (a+b) | Ferredoxin-like | CcmK-like | CcmK-like | automated matches | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | CcmK-like | 8081348 | 3001326 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | BMC | e3bn4A1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
B | BMC | e3bn4B1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
C | BMC | e3bn4C1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
D | BMC | e3bn4D1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
E | BMC | e3bn4E1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
F | BMC | e3bn4F1 | A: a+b two layers | X: Alpha-beta plaits | H: CcmK-like (From Topology) | T: CcmK-like | F: BMC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
B | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
C | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
D | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
E | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
F | 3.30.70.1710 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | BMC (bacterial microcompartment) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00936 | BMC domain (BMC) | BMC domain | Bacterial microcompartments are primitive organelles composed entirely of protein subunits. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. These proteins for hexameric struc ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Carbon dioxide-concentrating mechanism protein ccmK homolog 1 |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020808 | Bacterial microcompartments protein, conserved site | Conserved Site | |
IPR046380 | Carboxysome shell protein CcmK | Family | |
IPR000249 | Bacterial microcompartment domain | Domain | |
IPR050575 | Bacterial microcompartment shell | Family | |
IPR044872 | CcmK/CsoS1, bacterial microcompartment domain | Domain | |
IPR037233 | CcmK-like superfamily | Homologous Superfamily |