3BIT
Crystal structure of yeast Spt16 N-terminal Domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_M24 | e3bitA1 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: Creatinase/aminopeptidase (From Topology) | T: Creatinase/aminopeptidase | F: Peptidase_M24 | ECOD (1.6) |
A | FACT-Spt16_Nlob | e3bitA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Creatinase/prolidase N-terminal domain (From Topology) | T: Creatinase/prolidase N-terminal domain | F: FACT-Spt16_Nlob | ECOD (1.6) |
B | Peptidase_M24 | e3bitB1 | A: a+b duplicates or obligate multimers | X: Creatinase/aminopeptidase-like | H: Creatinase/aminopeptidase (From Topology) | T: Creatinase/aminopeptidase | F: Peptidase_M24 | ECOD (1.6) |
B | FACT-Spt16_Nlob | e3bitB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Creatinase/prolidase N-terminal domain (From Topology) | T: Creatinase/prolidase N-terminal domain | F: FACT-Spt16_Nlob | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
A | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
B | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
B | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00557 | Metallopeptidase family M24 (Peptidase_M24) | Metallopeptidase family M24 | This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3]. | Domain | |
PF14826 | FACT complex subunit SPT16 N-terminal lobe domain (FACT-Spt16_Nlob) | FACT complex subunit SPT16 N-terminal lobe domain | The FACT or facilitator of chromatin transcription complex binds to and alters the properties of nucleosomes. This family represents the N-terminal lobe of the NTD, or N-terminal domain, and acts as a protein-protein interaction domain presumably wit ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033825 | FACT complex subunit Spt16, peptidase M24-like domain | Domain | |
IPR048969 | FACT complex subunit SPT16, C-terminal domain | Domain | |
IPR029149 | Creatinase/Aminopeptidase P/Spt16, N-terminal | Homologous Superfamily | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR013719 | Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain | Domain | |
IPR040258 | FACT complex subunit Spt16 | Family | |
IPR029148 | FACT complex subunit Spt16, N-terminal lobe domain | Domain | |
IPR013953 | FACT complex subunit Spt16 domain | Domain | |
IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily | |
IPR000994 | Peptidase M24 | Domain |