3A8J
Crystal Structure of ET-EHred complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Aminomethyltransferase beta-barrel domain-like | 8056085 | 3000024 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Folate-binding domain-like | 8056084 | 3000025 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Folate-binding domain-like | 8056084 | 3000025 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Aminomethyltransferase beta-barrel domain-like | 8056085 | 3000024 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Folate-binding domain-like | 8056084 | 3000025 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Aminomethyltransferase beta-barrel domain-like | 8056085 | 3000024 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Aminomethyltransferase beta-barrel domain-like | 8056085 | 3000024 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Folate-binding domain-like | 8056084 | 3000025 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Single hybrid motif | 8077749 | 3001880 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Single hybrid motif | 8077749 | 3001880 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GCV_T_C | e3a8jA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
A | GCV_T_N | e3a8jA3 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N | ECOD (1.6) |
A | GCV_T_N1 | e3a8jA2 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
B | GCV_T_C | e3a8jB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
B | GCV_T_N | e3a8jB3 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N | ECOD (1.6) |
B | GCV_T_N1 | e3a8jB2 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
C | GCV_T_C | e3a8jC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
C | GCV_T_N | e3a8jC3 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N | ECOD (1.6) |
C | GCV_T_N1 | e3a8jC2 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
D | GCV_T_C | e3a8jD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
D | GCV_T_N | e3a8jD3 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N | ECOD (1.6) |
D | GCV_T_N1 | e3a8jD2 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
E | GCV_H | e3a8jE1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: GCV_H | ECOD (1.6) |
F | GCV_H | e3a8jF1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: GCV_H | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01571 | Aminomethyltransferase folate-binding domain (GCV_T) | Aminomethyltransferase folate-binding domain | This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ... | Domain | |
PF08669 | Glycine cleavage T-protein C-terminal barrel domain (GCV_T_C) | Glycine cleavage T-protein C-terminal barrel domain | This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ... | Domain | |
PF01597 | Glycine cleavage H-protein (GCV_H) | Glycine cleavage H-protein | This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. A lipoyl group is attached to a comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013977 | Glycine cleavage T-protein, C-terminal barrel domain | Domain | |
IPR028896 | Aminomethyltransferase-like | Family | |
IPR022903 | Glycine cleavage system T protein, bacteria | Family | |
IPR006223 | Glycine cleavage system T protein | Family | |
IPR006222 | Aminomethyltransferase, folate-binding domain | Domain | |
IPR029043 | Glycine cleavage T-protein/YgfZ, C-terminal | Homologous Superfamily | |
IPR027266 | GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1 | Homologous Superfamily | |
IPR017453 | Glycine cleavage system H-protein, subgroup | Family | |
IPR002930 | Glycine cleavage system H-protein | Family | |
IPR033753 | Glycine cleavage system H-protein/Simiate | Family | |
IPR011053 | Single hybrid motif | Homologous Superfamily | |
IPR003016 | 2-oxo acid dehydrogenase, lipoyl-binding site | Binding Site | |
IPR000089 | Biotin/lipoyl attachment | Domain |