Annotations: 31MR

CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-PA-domain monoclonal antibody

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth L]	Anti-PA-domain monoclonal antibody (3F2G10) Light chain variable region	-	-	-
C [auth H]	Anti-PA-domain monoclonal antibody (3F2G10) Heavy chain variable region	-	-	-
B	Cell envelope proteinase A	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane
A	Cell envelope proteinase A	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR034216	C5a peptidase-like domain	Domain
B	IPR023828	Peptidase S8, subtilisin, Ser-active site	Active Site
B	IPR022398	Peptidase S8, subtilisin, His-active site	Active Site
B	IPR046450	PA domain superfamily	Homologous Superfamily
B	IPR051048	Peptidase S8/S53 subtilisin kexin sedolisin	Family
B	IPR019931	LPXTG cell wall anchor motif	Conserved Site
B	IPR000209	Peptidase S8/S53 domain	Domain
B	IPR015500	Peptidase S8, subtilisin-related	Family
B	IPR036852	Peptidase S8/S53 domain superfamily	Homologous Superfamily
B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B	IPR005877	YSIRK Gram-positive signal peptide	Domain
B	IPR003137	PA domain	Domain
B	IPR023827	Peptidase S8, subtilisin, Asp-active site	Active Site
B	IPR010435	C5a peptidase/Subtilisin-like protease SBT2-like, Fn3-like domain	Domain
A	IPR034216	C5a peptidase-like domain	Domain
A	IPR023828	Peptidase S8, subtilisin, Ser-active site	Active Site
A	IPR022398	Peptidase S8, subtilisin, His-active site	Active Site
A	IPR046450	PA domain superfamily	Homologous Superfamily
A	IPR051048	Peptidase S8/S53 subtilisin kexin sedolisin	Family
A	IPR019931	LPXTG cell wall anchor motif	Conserved Site
A	IPR000209	Peptidase S8/S53 domain	Domain
A	IPR015500	Peptidase S8, subtilisin-related	Family
A	IPR036852	Peptidase S8/S53 domain superfamily	Homologous Superfamily
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR005877	YSIRK Gram-positive signal peptide	Domain
A	IPR003137	PA domain	Domain
A	IPR023827	Peptidase S8, subtilisin, Asp-active site	Active Site
A	IPR010435	C5a peptidase/Subtilisin-like protease SBT2-like, Fn3-like domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

31MR | pdb_000031mr

CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-PA-domain monoclonal antibody

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage