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 2YHB | pdb_00002yhb

Crystal Structure of the N. crassa QDE-2 AGO MID-PIWI Domains

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMid domain of argonaute 8053695 4004605 SCOP2 (2022-06-29)
ASCOP2 FamilyPIWI domain 8053696 4002242 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyMid domain of argonaute 8053697 3002210 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRibonuclease H-like 8053698 3000143 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_S8e2yhbA5 A: alpha arraysX: Fusion glycoprotein F2H: Fusion glycoprotein F2T: Fusion glycoprotein F2F: Peptidase_S8ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
POST-TRANSCRIPTIONAL GENE SILENCING PROTEIN QDE-2 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036397Ribonuclease H superfamilyHomologous Superfamily
IPR045246Argonaute-like, PIWI domainDomain
IPR032472Argonaute linker 2 domainDomain
IPR036085PAZ domain superfamilyHomologous Superfamily
IPR003165Piwi domainDomain
IPR014811Argonaute, linker 1 domainDomain
IPR003100PAZ domainDomain
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
IPR032474Protein argonaute, N-terminalDomain