2PRV

Crystal structure of an uncharacterized protein (yobk, bsu18990) from bacillus subtilis at 1.30 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2prva1	Alpha and beta proteins (a+b)	SMI1/KNR4-like	SMI1/KNR4-like	SMI1/KNR4-like	Uncharacterized protein YobK	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
A	d2prva2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2prvb2	Alpha and beta proteins (a+b)	SMI1/KNR4-like	SMI1/KNR4-like	SMI1/KNR4-like	Uncharacterized protein YobK	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2prvb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	SMI1/KNR4-like	8023640	4002285	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SMI1/KNR4-like	8036020	3001048	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	SMI1/KNR4-like	8036020	3001048	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SUKH_5_1	e2prvA1	A: a+b two layers	X: SMI1/KNR4-like (From Topology)	H: SMI1/KNR4-like (From Topology)	T: SMI1/KNR4-like	F: SUKH_5_1	ECOD (1.6)
B	SUKH_5_1	e2prvB1	A: a+b two layers	X: SMI1/KNR4-like (From Topology)	H: SMI1/KNR4-like (From Topology)	T: SMI1/KNR4-like	F: SUKH_5_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1580.10	Alpha Beta	3-Layer(aba) Sandwich	SMI1/KNR4-like	SMI1/KNR4-like	CATH (4.3.0)
B	3.40.1580.10	Alpha Beta	3-Layer(aba) Sandwich	SMI1/KNR4-like	SMI1/KNR4-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF14567	SMI1-KNR4 cell-wall (SUKH_5)	SMI1-KNR4 cell-wall	Members of this family are related to the SMI1/KNR4-like or SUKH superfamily of proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Uncharacterized protein yobK	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR037883	Knr4/Smi1-like domain superfamily	Homologous Superfamily
A, B	IPR018958	Knr4/Smi1-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.