2KI7
The solution structure of RPP29-RPP21 complex from Pyrococcus furiosus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | RNase P subunit p29-like | 8063357 | 4000863 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Rof/RNase P subunit-like | 8063358 | 3001815 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Rpp21-like | 8045167 | 4004333 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Zinc beta-ribbon | 8057025 | 3001238 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Rpp21 N-terminal region-like | 8057024 | 3002379 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UPF0086 | e2ki7A1 | A: beta barrels | X: SH3 | H: RNase P subunit p29 (From Topology) | T: RNase P subunit p29 | F: UPF0086 | ECOD (1.6) |
B | Rpr2 | e2ki7B1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Rpr2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.210 | Mainly Beta | Roll | SH3 type barrels. | Ribonuclease P/MRP, subunit p29 | CATH (4.3.0) |
B | 1.20.5.420 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Immunoglobulin FC, subunit C | CATH (4.3.0) |
B | 6.20.50.20 | Special | Other non-globular | N-terminal domain of TfIIb | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01868 | Ribonuclease P/MRP, subunit p29 (RNase_P-MRP_p29) | Ribonuclease P/MRP, subunit p29 | - | Family | |
PF04032 | RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) | RNAse P Rpr2/Rpp21/SNM1 subunit domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023538 | Ribonuclease P protein subunit RNP1 | Family | |
IPR036980 | Ribonuclease P/MRP subunit Rpp29 superfamily | Homologous Superfamily | |
IPR002730 | Ribonuclease P protein subunit Rpp29/RNP1 | Family | |
IPR023534 | Rof/RNase P-like | Homologous Superfamily | |
IPR016848 | Ribonuclease P/MRP subunit Rpp29 | Family | |
IPR007175 | Ribonuclease P subunit, Rpr2/Snm1/Rpp21 | Family | |
IPR016432 | Ribonuclease P subunit RNP4 | Family |