2EUV
Principles of protein-DNA recognition revealed in the structural analysis of Ndt80-MSE DNA complexes
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d2euva_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | DNA-binding domain from NDT80 | DNA-binding domain from NDT80 | baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | p53-like transcription factors | 8040176 | 3000758 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | NDT80_PhoG | e2euvA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: NDT80_PhoG | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 2.60.40.1390 | Mainly Beta | Sandwich | Immunoglobulin-like | NDT80 DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF05224 | NDT80 / PhoG like DNA-binding family (NDT80_PhoG) | NDT80 / PhoG like DNA-binding family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily |
C [auth A] | IPR024061 | NDT80 DNA-binding domain | Domain |
C [auth A] | IPR037141 | NDT80 DNA-binding domain superfamily | Homologous Superfamily |
C [auth A] | IPR052605 | Fungal transcription regulator | Family |