2ZW9
Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Kelch_4 | e2zw9A2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Kelch_4 | ECOD (1.6) |
A | LCM | e2zw9A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: LCM | ECOD (1.6) |
B | Kelch_4 | e2zw9B3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Kelch_4 | ECOD (1.6) |
B | LCM | e2zw9B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: LCM | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
A | 2.120.10.80 | Mainly Beta | 6 Propeller | Neuraminidase | Kelch-type beta propeller | CATH (4.3.0) |
B | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
B | 2.120.10.80 | Mainly Beta | 6 Propeller | Neuraminidase | Kelch-type beta propeller | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01344 | Kelch motif (Kelch_1) | Kelch motif | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007213 | Methyltransferase Ppm1/Ppm2/Tcmp | Family | |
IPR015915 | Kelch-type beta propeller | Homologous Superfamily | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR006652 | Kelch repeat type 1 | Repeat | |
IPR011043 | Galactose oxidase/kelch, beta-propeller | Homologous Superfamily |