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 2ZUV | pdb_00002zuv

Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc, Ethylene glycol, and nitrate

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyLacto-N-biose phosphorylase N-terminal domain-like 8044996 4004244 SCOP2 (2022-06-29)
BSCOP2 FamilyLacto-N-biose phosphorylase middle domain-like 8046906 4005361 SCOP2 (2022-06-29)
BSCOP2 FamilyLacto-N-biose phosphorylase C-terminal domain-like 8046907 4005362 SCOP2 (2022-06-29)
BSCOP2 Superfamily(Trans)glycosidases 8054007 3000313 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyClass I glutamine amidotransferase-like 8054008 3001405 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyGlycosyl hydrolase domain-like 8054009 3001528 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyGlycosyl hydrolase domain-like 8054009 3001528 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClass I glutamine amidotransferase-like 8054008 3001405 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8054007 3000313 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BU6-snRNA_bdge2zuvB1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: U6-snRNA_bdgECOD (v295.2)
AU6-snRNA_bdge2zuvA1 A: alpha arraysX: Alpha helical domain of ribonucleotide reductasesH: Alpha helical domain of ribonucleotide reductasesT: Alpha helical domain of ribonucleotide reductasesF: U6-snRNA_bdgECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Lacto-N-biose phosphorylase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR029062Class I glutamine amidotransferase-likeHomologous Superfamily
A, B
IPR035080Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domainDomain
A, B
IPR035356Lacto-N-biose phosphorylase, C-terminal domainDomain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR035363Lacto-N-biose phosphorylase, central domainDomain
A, B
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily
A, B
IPR012711Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylaseFamily