2ZKX
Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2zkxa_ | All beta proteins | Immunoglobulin-like beta-sandwich | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase, SOD | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2zkxb_ | All beta proteins | Immunoglobulin-like beta-sandwich | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase, SOD | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d2zkxc_ | All beta proteins | Immunoglobulin-like beta-sandwich | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase, SOD | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d2zkxd_ | All beta proteins | Immunoglobulin-like beta-sandwich | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase-like | Cu,Zn superoxide dismutase, SOD | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cu, Zn superoxide dismutase-like | 8055253 | 3002059 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cu, Zn superoxide dismutase-like | 8055253 | 3002059 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cu, Zn superoxide dismutase-like | 8055253 | 3002059 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sod_Cu | e2zkxA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Cu,Zn superoxide dismutase-like | F: Sod_Cu | ECOD (1.6) |
B | Sod_Cu | e2zkxB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Cu,Zn superoxide dismutase-like | F: Sod_Cu | ECOD (1.6) |
C | Sod_Cu | e2zkxC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Cu,Zn superoxide dismutase-like | F: Sod_Cu | ECOD (1.6) |
D | Sod_Cu | e2zkxD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Cu,Zn superoxide dismutase-like | F: Sod_Cu | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.200 | Mainly Beta | Sandwich | Immunoglobulin-like | Superoxide dismutase, copper/zinc binding domain | CATH (4.3.0) |
B | 2.60.40.200 | Mainly Beta | Sandwich | Immunoglobulin-like | Superoxide dismutase, copper/zinc binding domain | CATH (4.3.0) |
C | 2.60.40.200 | Mainly Beta | Sandwich | Immunoglobulin-like | Superoxide dismutase, copper/zinc binding domain | CATH (4.3.0) |
D | 2.60.40.200 | Mainly Beta | Sandwich | Immunoglobulin-like | Superoxide dismutase, copper/zinc binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00080 | Copper/zinc superoxide dismutase (SODC) (Sod_Cu) | Copper/zinc superoxide dismutase (SODC) | superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SO ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024134 | Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone | Family | |
IPR036423 | Superoxide dismutase-like, copper/zinc binding domain superfamily | Homologous Superfamily | |
IPR018152 | Superoxide dismutase, copper/zinc, binding site | Binding Site | |
IPR001424 | Superoxide dismutase, copper/zinc binding domain | Domain |