Crystal structure of a murine antibody FAB 528
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2z4qa1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
| A | d2z4qa2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
| B | d2z4qb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
| B | d2z4qb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Rpf1_C | e2z4qA1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: Rpf1_C | ECOD (v294.1) |
| B | Rpf1_C | e2z4qB3 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: Rpf1_C | ECOD (v294.1) |
| B | Terminase_2 | e2z4qB1 | A: a/b three-layered sandwiches | X: small terminase oligomerization domain | H: small terminase oligomerization domain | T: small terminase oligomerization domain | F: Terminase_2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| Fv 528 | L-KAPPA | Mus musculus (house mouse) | IGKV1-117*01, IGKJ1*01, IGKJ1*02, IGKJ2*01, IGKC*03 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-2A_KAPPA | IMGT (202615-0) | |
| Fv 528 | VH-CH1 | Mus musculus (house mouse) | IGHV1S5*01, IGHV1-53*01, IGHJ2*02, IGHJ2*03, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-2A_KAPPA | IMGT (202615-0) |
