2YY3
Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | eEF-1beta-like | 8063607 | 4001327 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | eEF-1beta-like | 8063608 | 3001297 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | eEF-1beta-like | 8063608 | 3001297 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | eEF-1beta-like | 8063608 | 3001297 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EF1_GNE_1 | e2yy3A1 | A: a+b two layers | X: Alpha-beta plaits | H: eEF-1beta-like (From Topology) | T: eEF-1beta-like | F: EF1_GNE_1 | ECOD (1.6) |
B | EF1_GNE_1 | e2yy3B1 | A: a+b two layers | X: Alpha-beta plaits | H: eEF-1beta-like (From Topology) | T: eEF-1beta-like | F: EF1_GNE_1 | ECOD (1.6) |
C | EF1_GNE_1 | e2yy3C1 | A: a+b two layers | X: Alpha-beta plaits | H: eEF-1beta-like (From Topology) | T: eEF-1beta-like | F: EF1_GNE_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.60 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S6/Translation elongation factor EF1B | CATH (4.3.0) |
B | 3.30.70.60 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S6/Translation elongation factor EF1B | CATH (4.3.0) |
C | 3.30.70.60 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S6/Translation elongation factor EF1B | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00736 | EF-1 guanine nucleotide exchange domain (EF1_GNE) | EF-1 guanine nucleotide exchange domain | This family is the guanine nucleotide exchange domain of EF-1 beta and EF-1 delta chains. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Elongation factor 1-beta | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004542 | Translation elongation factor EF1B, beta chain, archaeal | Family | |
IPR036219 | Translation elongation factor eEF-1beta-like superfamily | Homologous Superfamily | |
IPR014038 | Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain | Domain | |
IPR014717 | Translation elongation factor EF1B/small ribosomal subunit protein bS6 | Homologous Superfamily |