2YQ2
Structure of BVDV1 envelope glycoprotein E2, pH8
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Pestivirus envelope glycoprotein E2-like | 8045371 | 4004442 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Pestivirus envelope glycoprotein E2-like | 8090349 | 3002436 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Pestivirus envelope glycoprotein E2-like | 8090349 | 3002436 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pestivirus_E2_2nd | e2yq2A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domain in envelope glycoprotein E2 (From Topology) | T: Ig-like domain in envelope glycoprotein E2 | F: Pestivirus_E2_2nd | ECOD (1.6) |
A | Pestivirus_E2_1st | e2yq2A1 | A: beta sandwiches | X: N-terminal domain in envelope glycoprotein E2 (From Topology) | H: N-terminal domain in envelope glycoprotein E2 (From Topology) | T: N-terminal domain in envelope glycoprotein E2 | F: Pestivirus_E2_1st | ECOD (1.6) |
A | Pestivirus_E2_3rd | e2yq2A3 | A: beta sandwiches | X: C-terminal region of envelope glycoprotein E2 (From Topology) | H: C-terminal region of envelope glycoprotein E2 (From Topology) | T: C-terminal region of envelope glycoprotein E2 | F: Pestivirus_E2_3rd | ECOD (1.6) |
B | Pestivirus_E2_2nd | e2yq2B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domain in envelope glycoprotein E2 (From Topology) | T: Ig-like domain in envelope glycoprotein E2 | F: Pestivirus_E2_2nd | ECOD (1.6) |
B | Pestivirus_E2_1st | e2yq2B2 | A: beta sandwiches | X: N-terminal domain in envelope glycoprotein E2 (From Topology) | H: N-terminal domain in envelope glycoprotein E2 (From Topology) | T: N-terminal domain in envelope glycoprotein E2 | F: Pestivirus_E2_1st | ECOD (1.6) |
B | Pestivirus_E2_3rd | e2yq2B3 | A: beta sandwiches | X: C-terminal region of envelope glycoprotein E2 (From Topology) | H: C-terminal region of envelope glycoprotein E2 (From Topology) | T: C-terminal region of envelope glycoprotein E2 | F: Pestivirus_E2_3rd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.320.20 | Mainly Beta | Sandwich | mini-chromosome maintenance (MCM) complex, domain 2 | Pestivirus envelope glycoprotein E2, domain A | CATH (4.3.0) |
A | 2.60.40.3000 | Mainly Beta | Sandwich | Immunoglobulin-like | Pestivirus envelope glycoprotein E2, domain B | CATH (4.3.0) |
B | 2.60.320.20 | Mainly Beta | Sandwich | mini-chromosome maintenance (MCM) complex, domain 2 | Pestivirus envelope glycoprotein E2, domain A | CATH (4.3.0) |
B | 2.60.40.3000 | Mainly Beta | Sandwich | Immunoglobulin-like | Pestivirus envelope glycoprotein E2, domain B | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16329 | Pestivirus envelope glycoprotein E2 (Pestivirus_E2) | Pestivirus envelope glycoprotein E2 | - | Domain |