2YNJ

GroEL at sub-nanometer resolution by Constrained Single Particle Tomography


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACpn60_TCP1_1ste2ynjA1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ACpn60_TCP1_2nd_2e2ynjA3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ACpn60_TCP1_3rde2ynjA2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
BCpn60_TCP1_1ste2ynjB1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
BCpn60_TCP1_2nd_2e2ynjB3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
BCpn60_TCP1_3rde2ynjB2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
CCpn60_TCP1_1ste2ynjC1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
CCpn60_TCP1_2nd_2e2ynjC3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
CCpn60_TCP1_3rde2ynjC2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
DCpn60_TCP1_1ste2ynjD1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
DCpn60_TCP1_2nd_2e2ynjD3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
DCpn60_TCP1_3rde2ynjD2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
ECpn60_TCP1_1ste2ynjE1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ECpn60_TCP1_2nd_2e2ynjE3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ECpn60_TCP1_3rde2ynjE2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
FCpn60_TCP1_1ste2ynjF1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
FCpn60_TCP1_2nd_2e2ynjF3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
FCpn60_TCP1_3rde2ynjF2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
GCpn60_TCP1_1ste2ynjG1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
GCpn60_TCP1_2nd_2e2ynjG3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
GCpn60_TCP1_3rde2ynjG2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
HCpn60_TCP1_1ste2ynjH1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
HCpn60_TCP1_2nd_2e2ynjH3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
HCpn60_TCP1_3rde2ynjH2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
ICpn60_TCP1_1ste2ynjI1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ICpn60_TCP1_2nd_2e2ynjI3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ICpn60_TCP1_3rde2ynjI2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
JCpn60_TCP1_1ste2ynjJ1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
JCpn60_TCP1_2nd_2e2ynjJ3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
JCpn60_TCP1_3rde2ynjJ2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
KCpn60_TCP1_1ste2ynjK1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
KCpn60_TCP1_2nd_2e2ynjK3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
KCpn60_TCP1_3rde2ynjK2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
LCpn60_TCP1_1ste2ynjL1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
LCpn60_TCP1_2nd_2e2ynjL3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
LCpn60_TCP1_3rde2ynjL2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
MCpn60_TCP1_1ste2ynjM1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
MCpn60_TCP1_2nd_2e2ynjM3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
MCpn60_TCP1_3rde2ynjM2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
NCpn60_TCP1_1ste2ynjN1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
NCpn60_TCP1_2nd_2e2ynjN3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
NCpn60_TCP1_3rde2ynjN2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
60 KDA CHAPERONIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001844Chaperonin Cpn60/GroELFamily
A, B, C, D, E
IPR018370Chaperonin Cpn60, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily