2YN9
Cryo-EM structure of gastric H+,K+-ATPase with bound rubidium
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00122 | e2yn9A7 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: PF00122 | ECOD (1.6) |
A | PF00122,PF00689,PF00690 | e2yn9A6 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Calcium ATPase transmembrane domain M | F: PF00122,PF00689,PF00690 | ECOD (1.6) |
A | PF13246 | e2yn9A2 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: PF13246 | ECOD (1.6) |
B | PF00287 | e2yn9B3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00287 | ECOD (1.6) |
B | PF00287 | e2yn9B2 | A: extended segments | X: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | H: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | T: Transmembrane helix in sodium-potassium ATPase beta subunit | F: PF00287 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00689 | Cation transporting ATPase, C-terminus (Cation_ATPase_C) | Cation transporting ATPase, C-terminus | - | Family | |
PF00702 | haloacid dehalogenase-like hydrolase (Hydrolase) | haloacid dehalogenase-like hydrolase | This family is structurally different from the alpha/beta hydrolase family (Pfam:PF00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted fo ... | Domain | |
PF00690 | Cation transporter/ATPase, N-terminus (Cation_ATPase_N) | Cation transporter/ATPase, N-terminus | Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. | Domain | |
PF00122 | E1-E2 ATPase (E1-E2_ATPase) | E1-E2 ATPase | - | Family | |
PF13246 | Cation transport ATPase (P-type) (Cation_ATPase) | Cation transport ATPase (P-type) | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005775 | P-type ATPase subfamily IIC, subunit alpha | Family | |
IPR004014 | Cation-transporting P-type ATPase, N-terminal | Domain | |
IPR001757 | P-type ATPase | Family | |
IPR044492 | P-type ATPase, haloacid dehalogenase domain | Domain | |
IPR006068 | Cation-transporting P-type ATPase, C-terminal | Domain | |
IPR018303 | P-type ATPase, phosphorylation site | PTM | |
IPR023298 | P-type ATPase, transmembrane domain superfamily | Homologous Superfamily | |
IPR015127 | Gastric H+/K+-transporter P-type ATPase, N-terminal | Domain | |
IPR050510 | Cation transport ATPase (P-type) | Family | |
IPR023214 | HAD superfamily | Homologous Superfamily | |
IPR008250 | P-type ATPase, A domain superfamily | Homologous Superfamily | |
IPR036412 | HAD-like superfamily | Homologous Superfamily | |
IPR023299 | P-type ATPase, cytoplasmic domain N | Homologous Superfamily | |
IPR000402 | Sodium/potassium-transporting ATPase subunit beta | Family | |
IPR038702 | Sodium/potassium-transporting ATPase subunit beta superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | P-type ATPase (P-ATPase) | P-ATPase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |