Annotations: 2YJ0

X-ray structure of chemically engineered Mycobacterium tuberculosis Dodecin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2yj0f_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
E	d2yj0e_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
D	d2yj0d_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
C	d2yj0c_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
B	d2yj0b_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)
A	d2yj0a_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	automated matches	automated matches	(Mycobacterium tuberculosis H37Rv ) [TaxId: 83332 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Dodecin-like	8086102	3000608	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	PNP_UDP_1	e2yj0F1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)
E	PNP_UDP_1	e2yj0E1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)
D	PNP_UDP_1	e2yj0D1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)
C	PNP_UDP_1	e2yj0C1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)
B	PNP_UDP_1	e2yj0B1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)
A	PNP_UDP_1	e2yj0A1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: PNP_UDP_1	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
E	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
D	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
C	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
B	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
A	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF07311	Dodecin (Dodecin)	Dodecin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	DODECIN	-	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR036694	Dodecin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR009923	Dodecin	Family
A, B, C, D, E A, B, C, D, E, F	IPR025543	Dodecin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR050049	Dodecin, bacteria	Family