2YD4
Crystal structure of the N-terminal Ig1-2 module of Chicken Receptor Protein Tyrosine Phosphatase Sigma
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2yd4a1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | CHICKEN (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
A | d2yd4a3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | CHICKEN (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | I-set | e2yd4A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set | ECOD (1.6) |
A | I-set_2 | e2yd4A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13927 | Immunoglobulin domain (Ig_3) | Immunoglobulin domain | This family contains immunoglobulin-like domains. | Domain | |
PF07679 | Immunoglobulin I-set domain (I-set) | Immunoglobulin I-set domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003598 | Immunoglobulin subtype 2 | Domain | |
IPR003595 | Protein-tyrosine phosphatase, catalytic | Domain | |
IPR003599 | Immunoglobulin domain subtype | Domain | |
IPR013098 | Immunoglobulin I-set | Domain | |
IPR016130 | Protein-tyrosine phosphatase, active site | Active Site | |
IPR050713 | Receptor-type Tyrosine-protein Phosphatases/Ushers | Family | |
IPR029021 | Protein-tyrosine phosphatase-like | Homologous Superfamily | |
IPR003961 | Fibronectin type III | Domain | |
IPR000242 | Tyrosine-specific protein phosphatase, PTPase domain | Domain | |
IPR000387 | Tyrosine-specific protein phosphatases domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR007110 | Immunoglobulin-like domain | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |