BC1 fragment of streptococcal M1 protein in complex with human fibrinogen


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8037157 3001395 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8039526 3001470 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8039526 3001470 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFibrinogen C-terminal domain-like 8037157 3001395 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8037157 3001395 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8039526 3001470 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8039526 3001470 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8037157 3001395 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8038837 3001470 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8038835 3001395 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8038837 3001470 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8038835 3001395 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFibrinogen C-terminal domain-like 8038835 3001395 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8038837 3001470 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFibrinogen C-terminal domain-like 8038835 3001395 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8038837 3001470 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8043725 3001470 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8043725 3001470 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8043725 3001470 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFibrinogen coiled-coil and central regions 8043725 3001470 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LChloroa_b-binde2xnxL1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
IChloroa_b-binde2xnxI1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
FChloroa_b-binde2xnxF1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
CChloroa_b-binde2xnxC1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
KChloroa_b-binde2xnxK1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
HChloroa_b-binde2xnxH1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
EChloroa_b-binde2xnxE1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
BChloroa_b-binde2xnxB1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
N6.10.140.780 Special Helix non-globular Helix Hairpins CATH (4.3.0)
M6.10.140.780 Special Helix non-globular Helix Hairpins CATH (4.3.0)
L3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
L4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
I3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
I4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
F3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
F4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
C3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
C4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
K1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
K3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
K4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
H3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
H4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
E3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
E4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
B3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
B4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
J1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
G1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
A1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, F, I, L
PF00147Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C)Fibrinogen beta and gamma chains, C-terminal globular domainDomain
B, E, H, K
PF00147Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C)Fibrinogen beta and gamma chains, C-terminal globular domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M, N
M PROTEIN- -
C, F, I, L
FIBRINOGEN GAMMA CHAIN
B, E, H, K
FIBRINOGEN BETA CHAIN
A, D, G, J
FIBRINOGEN ALPHA CHAIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M, N
IPR005877YSIRK Gram-positive signal peptideDomain
M, N
IPR019950M protein-type anchor motifConserved Site
M, N
IPR049896Streptococcal M proteins C repeatRepeat
M, N
IPR019931LPXTG cell wall anchor motifConserved Site
M, N
IPR049895Streptococcal M protein, D repeatsRepeat
M, N
IPR003345M protein repeatRepeat
M, N
IPR005877YSIRK Gram-positive signal peptideDomain
M, N
IPR049896Streptococcal M proteins C repeatRepeat
C, F, I, L
IPR037579Fibrinogen/angiopoietin-likeFamily
C, F, I, L
IPR012290Fibrinogen, alpha/beta/gamma chain, coiled coil domainDomain
C, F, I, L
IPR020837Fibrinogen, conserved siteConserved Site
C, F, I, L
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Homologous Superfamily
C, F, I, L
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainDomain
C, F, I, L
IPR036056Fibrinogen-like, C-terminalHomologous Superfamily
B, E, H, K
IPR037579Fibrinogen/angiopoietin-likeFamily
B, E, H, K
IPR012290Fibrinogen, alpha/beta/gamma chain, coiled coil domainDomain
B, E, H, K
IPR020837Fibrinogen, conserved siteConserved Site
B, E, H, K
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Homologous Superfamily
B, E, H, K
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainDomain
B, E, H, K
IPR036056Fibrinogen-like, C-terminalHomologous Superfamily
A, D, G, J
IPR037579Fibrinogen/angiopoietin-likeFamily
A, D, G, J
IPR012290Fibrinogen, alpha/beta/gamma chain, coiled coil domainDomain
A, D, G, J
IPR020837Fibrinogen, conserved siteConserved Site
A, D, G, J
IPR021996Fibrinogen alpha C domainDomain
A, D, G, J
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Homologous Superfamily
A, D, G, J
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainDomain
A, D, G, J
IPR036056Fibrinogen-like, C-terminalHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C, F, I, L
P02679
B, E, H, K
P02675
A, D, G, J
P02671