2X7R
Crystal structure of a late fusion intermediate of HIV-1 gp41
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GP41_1st | e2x7rA1 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: GP41_1st | ECOD (1.6) |
D | GP41_1st | e2x7rD1 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: GP41_1st | ECOD (1.6) |
F [auth N] | GP41_1st | e2x7rN1 | A: a+b duplicates or obligate multimers | X: MPER trimer (From Topology) | H: MPER trimer (From Topology) | T: MPER trimer | F: GP41_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
C | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
E | 1.10.287.210 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D, F [auth N] | IPR000777 | Human immunodeficiency virus 1, envelope glycoprotein Gp120 | Domain |
A, D, F [auth N] | IPR036377 | Gp120 core superfamily | Homologous Superfamily |
A, D, F [auth N] | IPR000328 | Retroviral envelope protein GP41-like | Domain |
A, D, F [auth N] | IPR037527 | Envelope glycoprotein Gp160 | Family |
IPR000777 | Human immunodeficiency virus 1, envelope glycoprotein Gp120 | Domain | |
IPR036377 | Gp120 core superfamily | Homologous Superfamily | |
IPR000328 | Retroviral envelope protein GP41-like | Domain | |
IPR037527 | Envelope glycoprotein Gp160 | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Peptides | Alpha-helical peptides | Viral fusion and anchor peptides | Juxtamembrane peptides of viral envelope glycoproteins |