Annotations: 2WYY

CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth M]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
I [auth L]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
H [auth K]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
G [auth J]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
F [auth I]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth M]	Tachylectin	e2wyyM1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
I [auth L]	Tachylectin	e2wyyL1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
H [auth K]	Tachylectin	e2wyyK1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
G [auth J]	Tachylectin	e2wyyJ1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
F [auth I]	Tachylectin	e2wyyI1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
E [auth H]	Tachylectin	e2wyyH1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
D [auth F]	Tachylectin	e2wyyF1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
C [auth D]	Tachylectin	e2wyyD1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
B [auth C]	Tachylectin	e2wyyC1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Tachylectin	ECOD (v295.2)
A	Pyr_redox	e2wyyA1	A: alpha arrays	X: Immunoglobulin-like beta-sandwich	H: HTH	T: winged helix domain	F: Pyr_redox	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	PF00945	Rhabdovirus nucleocapsid protein (Rhabdo_ncap)	Rhabdovirus nucleocapsid protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
K [auth R], L [auth S]	POLY-URIDINE	-	-	-
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	NUCLEOPROTEIN	RNA binding binding nucleic acid binding	viral gene expression viral process viral transcription nucleobase-containing compound metabolic process RNA replication RNA metabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process nucleic acid metabolic process	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	IPR035961	Rhabdovirus nucleoprotein-like	Homologous Superfamily
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	IPR000448	Rhabdovirus nucleocapsid	Domain
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	IPR023330	Rhabdovirus nucleocapsid, N-terminal	Homologous Superfamily
A, B [auth C], C [auth D], D [auth F], E [auth H], A, B [auth C], C [auth D], D [auth F], E [auth H], F [auth I], G [auth J], H [auth K], I [auth L], J [auth M]	IPR023331	Rhabdovirus nucleocapsid, C-terminal	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.